Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKKLLFSAAVLTMVAGSTVEPVAQFATGMSIVRAAEVSQERPAKTTVNIYKLQADSYKSEITSNGGIENKDGEVISNYAKLGDNVKGLQGVQFKRYKVKTDISVDELKKLTTVEAADAKVGTILEEGVSLPQKTNAQGLVVDALDSKSNVRYLYVEDLKNSPSNITKAYAVPFVLELPVANSTGTGFLSEINIYPKNVVTDEPKTDKDVKKLGQDDAGYTIGEEFKWFLKSTIPANLGDYE--KFEITDKFADGLTYKSVGKIKIGSKTLNRDEHYTIDEPTVDNQNTLKITFKPEKFKEIAELLKGMTLVKNQDALDKATANTDDAAFLEIPVASTINEKAVLGKAIENTFELQYDHTPDKAD----NPKPS----NPPRKPEVHTGGKRFVKKDSTET-QTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYA-VDANAEGTAVTYK--LKETKAPEGYVIPD---KEIEFTVSQTSYNTKPTDITVDSADATPDTIKNNKRPSIPNTGGIGTAIFVAIGAAVMAFAVKGMKRRTKDN |
| 4HSQ Chain:A ((5-252)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTEKTVK-----DADQNIQDAYTYTIKADAPTWGKDKKLTAFRFEDELDKRLDFQKVTEVKAGDTVLGTSD-YTVNDPATDG-NKLVVTLTDEGLKKV---------------------KSGDKMSLTFEVKR---------KEVGNTTELK-----NRADVIFNNPNTDKEVKNKTNEVVTYHGKLKVVKKDGKEAGKVLKGAEFELYQCTSAAVLGKGPLT-VDGVKKWTTGD-------------DGTFTIDGLHVTDFEDGKEAAPATKKFCLKETKAPAGYALPDPNVTEIEFTRAKISEKDKFEGDDEVTLVSEIKNIKQGT------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20731 for 1646 contacts (12.6/contact) +
2D Compatibility (PS) -23739 + (NN) 2366 + (LL) 17628
1D Compatibility (HY) -10800 + (ID) 4200
Total energy: 1986.0 ( 1.21 by residue)
QMean score : 0.294
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