Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRLVKIVTIIRNNKIRTLIFVMGSLILLFPIVSQVSYYLASHQNINQFKREVAKIDTNTVERRIALANAYNETLS---RNPLLIDPFTSKQKEGLREYARMLEVHEQIGHVAIPSIGVDIPIYAGTSETVLQKGSGHLEGTSLPVGGLSTHSVLTAHRGLPTARLFTDLNKVKKGQIFYVTNIKETLAYKVVSIKVVDPTALSEVKIVNGKDYITLLTCTPYMINSHRLLVKGERIPYDSTEAEKHKEQTVQDYRLSLVLKILLVLLIGLFIVIMMRRWMQHRQ |
| 3RBK Chain:A ((17-214)) | ----------------------------------------------INAFKEAVTKIDRVEINRRLELAYAYNASIAGAK-YPALKDPYSAEQ---VVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKT------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110624 for 1504 contacts (-73.6/contact) +
2D Compatibility (PS) -19814 + (NN) -5297 + (LL) 9780
1D Compatibility (HY) -20800 + (ID) 5800
Total energy: -152555.0 ( -101.43 by residue)
QMean score : 0.513
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