Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEFTFEIVEKLLVLSENEKGWTKELNRVSFNGAPAKFDLRTWSPDHTKMGKGITLSNEEFKVILDAFRK
3PM7 Chain:A ((4-62))
--EFSYEILEEVAVLSENARGWRKELNLISWNGRPPKFDLREWAPDHEKMGKGITLTNEEFAELSKTIKS
General information:
TITO was launched using:
RESULT:
Template:
3PM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7108 for 351 contacts (20.3/contact) +
2D Compatibility (PS) -5877 + (NN) -320 + (LL) 180
1D Compatibility (HY) -6800 + (ID) 2050
Total energy: -7759.0 ( -22.11 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_3PM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PM7-query.scw
PDB file :
Tito_Scwrl_3PM7.pdb
: