Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKNSTLTKLTRVAILSALCVVLRYAFAPLPNIQPITAIFLITVVLFDLKEGVATVTITMLVSSFLMGFGPWVFLQIISFTLILCLWKFLIYPLTKAVCFGKITEVVLQTFFAGGLGVVYGVIIDTCFAWLYHMPWWTYVLAGLSFNMAHALSTCLFYPLLLPILRRFRNEKIH |
1SMZ Chain:A ((7-13)) | ------------------------------------------AGYLLGKINLKALAALAKKIL--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1374 for 18 contacts (-76.3/contact) +
2D Compatibility (PS) -594 + (NN) 1394 + (LL) 14616
1D Compatibility (HY) -400 + (ID) 50
Total energy: 13592.0 ( 755.11 by residue)
QMean score : -0.518
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