Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSISDIAKKAGVAKSTVSRVINHHPHVSDETRQKVMALITELDYIPNQLARDLSRGKTQKIGVVIPHTRHPYFTQLINGLLDAAKTTDYQLVMMPSDYNQELELSYLKQLKMEAIDALIFTSRAISLDIIETYAKYGR----IVVCEKLQEYNHLSSAYLDRYSSFLEAFSDMKLRGLEHLVLLFSRNNESSATYQS-ALLAYQEVYGQLSSPY---MVVGNVHDFNDGLN-LSYQLVKEVSIDGILATSDEVAAGLIKGYEESRKKCPY---IIGQECLLVGQLLK--LPTIDHKSYYLGKLAFKQALAEKISQEVLFSEFLSQDN |
| 3OQO Chain:A ((4-303)) | --TIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNIT---DEHVAEFKRSPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKG--HTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148500 for 2261 contacts (-65.7/contact) +
2D Compatibility (PS) -30843 + (NN) -10607 + (LL) 844
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -209606.0 ( -92.70 by residue)
QMean score : 0.502
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