Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLILKNRLKELRARDGINQTELAKLTGVSRQTISLIERGEYTPSVIIAMKVSQVFKESLENVFSLVSTEE
2LYL Chain:A ((4-61))
------NNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE--
General information:
TITO was launched using:
RESULT:
Template:
2LYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18942 for 412 contacts (-46.0/contact) +
2D Compatibility (PS) -6289 + (NN) -1561 + (LL) 804
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -33688.0 ( -81.77 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_2LYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYL-query.scw
PDB file :
Tito_Scwrl_2LYL.pdb
: