Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATITVFSKNNCMQCKMTKKFLDQHGADFEEINID--EKPEKIEYVKNLGFSAAPV---IEAGNV--VFSG-FQPSKLKELV
2L6C Chain:A ((22-100))
--AIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRDGKVAKVFSGIMNPRELQALY
General information:
TITO was launched using:
RESULT:
Template:
2L6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16513 for 408 contacts (-40.5/contact) +
2D Compatibility (PS) -7413 + (NN) -1501 + (LL) 352
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -32525.0 ( -79.72 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2L6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L6C-query.scw
PDB file :
Tito_Scwrl_2L6C.pdb
: