Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLFLSPSCTSCRKARAWLSKHEVAFEEHNIITSPLNKEELLQILSFTENGTEDIISTRSKVFQKLAI--DVDELSTSSLMELISENPSLLRRPIILDKKRMQIGFNEDEIRAFLPRDYRKQELKQATIRAEIEGKHD
2M46 Chain:A ((1-113))
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA---------------------
General information:
TITO was launched using:
RESULT:
Template:
2M46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72641 for 777 contacts (-93.5/contact) +
2D Compatibility (PS) -11391 + (NN) -2492 + (LL) 2128
1D Compatibility (HY) -10400 + (ID) 1400
Total energy: -96196.0 ( -123.80 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_2M46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M46-query.scw
PDB file :
Tito_Scwrl_2M46.pdb
: