Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITGIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTESGKIYEGEITLGYATSTEDSSGEVISRTPLTQSDLSEDVVDHAMKSFTGPITQVPPMYSAVKVNGKKLYEYARSGEEVERPKRQITISEFRRTSPLYFEKGICRFSFYVSCSKGTYVRTLAVDLGIKLGYASHMSFLKRTSSAGLSITQSLTLEEINEKYKQEDFSFLLPIEYGVLDLPKVNLTEEDKVEISYGRRILLE--NEADTLAAFYENRVIAILEKRGNEFKPHKVLL |
1ZE2 Chain:A ((1-272)) | MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETFDITGEVVEE---RECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRD-----VSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLN---VFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTKMILNGSQIHLEMLKEWD---GFKKGEVVRVFNEEGRLLALAEAER |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -86797 for 2056 contacts (-42.2/contact) +
2D Compatibility (PS) -28349 + (NN) -2953 + (LL) 1096
1D Compatibility (HY) -18000 + (ID) 5000
Total energy: -140003.0 ( -68.09 by residue)
QMean score : 0.378
|
|
|