Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQKYLLLVSDSGDALDL----------EYFYSIQDLKKNKDLGKFETRKSQIEKPGGYNELENKEVPFEYFKNNIVYPKGKPNITFDDFIIGAMDTKELKKLKVKSYLLKHPETELKDITYELPTQSKLIKK |
3EF0 Chain:A ((147-225)) | --------------------------------------------------------------VVVIDDRGDVWDWNPNLIKVVPYEFFVGIGDINS--------ALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 5527 for 238 contacts (23.2/contact) +
2D Compatibility (PS) -6122 + (NN) -962 + (LL) 6064
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 57.0 ( 0.24 by residue)
QMean score : 0.064
|
|
|