Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKCPIIALDFSDLASVTTFLEHF-PKEELLFVKIGMELYYSEGPSIIRYIKSLGHRIFLDLKLHDIPNTVRSSMSVLAKLGIDMTNVHAAGGVEMMKAAREGL----GEGPILLAVTQLTSTSQEQMQVDQHINLSVVDSVCHYAQKAQEAGLDGVVASAQEVKQIKKQTNEHFICLTPGIRPPQTNQLDDQKRTMTPEQARIVGADYIVVGRPITKAENPYQAYLEIKEEWNRIK
1L2U Chain:A ((18-243))
------VVALDYHNRDDALAFVDKIDPRDCRL--KVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDL-VDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIR-PQ---------IMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQR--
General information:
TITO was launched using:
RESULT:
Template:
1L2U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129202 for 1756 contacts (-73.6/contact) +
2D Compatibility (PS) -22482 + (NN) -7382 + (LL) 1440
1D Compatibility (HY) -13600 + (ID) 4700
Total energy: -175926.0 ( -100.19 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_1L2U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L2U-query.scw
PDB file :
Tito_Scwrl_1L2U.pdb
: