Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKDGKWDDGKLTDDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMPHVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDIIGVKPAEEYIFTVFAMPVGSYFKGGLTPTNFIVSKEYDRAAPNGTGAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANF---FGITKDNQFITP-LSPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDK------FTEAGACGTAAVISPIGGIQNGD-DFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD |
3DTF Chain:A ((46-372)) | ---------------------IDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDA-GFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTI--ADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106866 for 2524 contacts (-42.3/contact) +
2D Compatibility (PS) -33491 + (NN) -10844 + (LL) 1724
1D Compatibility (HY) -25200 + (ID) 6800
Total energy: -181477.0 ( -71.90 by residue)
QMean score : 0.446
|
|
|