Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKVRIYHNPNCGTSRNVLAIIRHCGIEPEIIYYLKTPPSRMELVELLLEMKLSARELLRTDVPAYEKFNLESSSVTDEEMIDAMIQDPILINRPIVVTSKGAKLCRPCEEILTILPVKMEKDFVKEDGQIIQSL
1S3D Chain:A ((1-128))
--NITIYHNPACGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLAKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQDAQKGAFTKEDGEKVVDE
General information:
TITO was launched using:
RESULT:
Template:
1S3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111696 for 960 contacts (-116.3/contact) +
2D Compatibility (PS) -13517 + (NN) -4971 + (LL) 312
1D Compatibility (HY) -13200 + (ID) 3450
Total energy: -146522.0 ( -152.63 by residue)
QMean score : 0.739
(partial model without unconserved sides chains):
PDB file :
Tito_1S3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3D-query.scw
PDB file :
Tito_Scwrl_1S3D.pdb
: