Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEEFLNTHNASILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNI----DDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSADDIQIYEFLKYYEIPVIIVATKADKIPRGKWNKHESSIKKKLN------FDKKDHFIVFSSVDRTGLD------ESWDTILSEL
4DHE Chain:A ((10-208))
--------HQARFFTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAEPVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQLFSALKRTGLDDAHALIESWLR-----
General information:
TITO was launched using:
RESULT:
Template:
4DHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71804 for 1352 contacts (-53.1/contact) +
2D Compatibility (PS) -19652 + (NN) -3696 + (LL) 1168
1D Compatibility (HY) -10400 + (ID) 3250
Total energy: -107634.0 ( -79.61 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_4DHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DHE-query.scw
PDB file :
Tito_Scwrl_4DHE.pdb
: