Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPL-VAENQVTIKEERVLEWLSKGAQPSDTVRNLLSKAGVMTKFHDQKFSK
1HNX Chain:P ((2-80))
--VKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEAREGA--
General information:
TITO was launched using:
RESULT:
Template:
1HNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36469 for 538 contacts (-67.8/contact) +
2D Compatibility (PS) -8037 + (NN) -2100 + (LL) 468
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -53388.0 ( -99.23 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_1HNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNX-query.scw
PDB file :
Tito_Scwrl_1HNX.pdb
: