Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKPISFRDKDGNFVSAADVWNAEKLEELFNTLNP-NRKLRLEREKLAKEKG
1WJ6 Chain:A ((56-93))
-----IKYLDEENEEVSIN---SQGEYEEALKMAVKQGNQLQMQVHEGSGPSS
General information:
TITO was launched using:
RESULT:
Template:
1WJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5186 for 189 contacts (-27.4/contact) +
2D Compatibility (PS) -3877 + (NN) -1373 + (LL) 156
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -12230.0 ( -64.71 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1WJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WJ6-query.scw
PDB file :
Tito_Scwrl_1WJ6.pdb
: