Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETYTLSNTLNIPKIGFGTWQLTEGEEAYKAVTHALKVGYTHIDTAQIYGNEHSVGRAIRDSGLARESIFLTTKIWNDKHDYHLAKASIDESLQKLGVDYIDLLLIHWPNPKALRENDAWKAGNAGTWKAMEEAYKEGKVKAIGVSNFMKHHLEALFETAEIKPMVNQIILAPGCAQEDLVRFCKGNDILLEAYSPFGTG---AIFENESIKAIAEKYGKSVAQVALRWSLDNGFLPLPKSATPKNIEANLDIFDFQLNEDDITTLIQLDSGIK-PKDPDNVSF
4GIE Chain:A ((17-283))----TLHNSVRMPQLGLGVWRAQDGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRESGVPREEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKKKF----------VDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGSGEEAGILKNHVLGEIAKKHNKSPAQVVIRWDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRIGADPDNFFP


General information:
TITO was launched using:
RESULT:

Template: 4GIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132896 for 2249 contacts (-59.1/contact) +
2D Compatibility (PS) -28739 + (NN) -14500 + (LL) 760
1D Compatibility (HY) -24800 + (ID) 5900
Total energy: -206075.0 ( -91.63 by residue)
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_4GIE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GIE-query.scw
PDB file : Tito_Scwrl_4GIE.pdb: