Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELVIRDIRKRFQETEVLRGASYRFYSGKITGVLGRNGAGKTTLFNILYGDLAADNGTICLLKDNHEYPLTDK-------DIGIVYSENYLPEFLTG-YEFVKF---YMDLHPSDDLMT-IDDYLDFMEIGQTERHRIIKGYSDGMKSKLSLICLMISKPKVILLDEPLTAVDVVSSIAIKRLLLELSEDH--IIILSTHIMALAEDLCDIVAVLDKGKLQTLDIDRKHEQFEERLLQVLKGDEYDK
3GFO Chain:A ((21-222))--------------THALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRI--LFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKL-PEDEIRKRVDNALKRTGI-EHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVIRKVNLRLPRIG


General information:
TITO was launched using:
RESULT:

Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143409 for 1366 contacts (-105.0/contact) +
2D Compatibility (PS) -20147 + (NN) -8046 + (LL) 1836
1D Compatibility (HY) -12800 + (ID) 3050
Total energy: -185616.0 ( -135.88 by residue)
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_3GFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFO-query.scw
PDB file : Tito_Scwrl_3GFO.pdb: