Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILREFCAENLTDLTRLDKAIISRVELCDNLAAGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKAIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQETGVRQAHGTRITQ
1X8C Chain:A ((24-198))
-----------------------RVELCAAPKEGGLTPSLGVLKSVRQRVT---IPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMC--ANPLYTLNNLAELGIARVLTSGQKSD--ALQGLSKIMELIAHRDAPI-IMAGAGVRAENLHHFL-DAGVLEVHSSAGAW
General information:
TITO was launched using:
RESULT:
Template:
1X8C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159535 for 1398 contacts (-114.1/contact) +
2D Compatibility (PS) -19502 + (NN) -10473 + (LL) 2424
1D Compatibility (HY) -14000 + (ID) 3150
Total energy: -204236.0 ( -146.09 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_1X8C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X8C-query.scw
PDB file :
Tito_Scwrl_1X8C.pdb
: