Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTILPFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTSLGVAGAHGKTSTTGLLAHVLKNIT-DTSFLIGDGTGRGSANA-----NYFVFEADEYERHFMPYHPEYSIITNIDFDHPDYFTGLEDVFNAFNDYAKQVQKGLFIYG------EDSKLHEITSKA--PIYYYGFEDSNDFIAKDITRTVNGSDFKVFY-NQEEIG-QFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRFTE-----KIIDDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNGEVKVEDLAAKIVKHS-------DLVTVENVSPL------LNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 1P31 Chain:A ((37-474)) | --------------------ILLNEGYQISGSDIADGVVTQR-LAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQPMVSVVTNMEPDHMDTYEG--DFEKMKATYVKFLHN-LPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVP--GKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQVDALIMLDVYAA------GEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESWK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183032 for 3325 contacts (-55.0/contact) +
2D Compatibility (PS) -43192 + (NN) -15816 + (LL) 2172
1D Compatibility (HY) -20400 + (ID) 6750
Total energy: -267018.0 ( -80.31 by residue)
QMean score : 0.440
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