Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTSKQRAFLKSEAHSMKPIIQIGKNGLNDQIKTSVRNALDARELIKVTLLQNTDEDIHDVAEVLEDEIGCDTVLKIGRILILYKESARKENRKISVKVKAVKSN
1RQ8 Chain:A ((1-96))
MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP---------
General information:
TITO was launched using:
RESULT:
Template:
1RQ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45782 for 744 contacts (-61.5/contact) +
2D Compatibility (PS) -10406 + (NN) -3372 + (LL) 804
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -69406.0 ( -93.29 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1RQ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RQ8-query.scw
PDB file :
Tito_Scwrl_1RQ8.pdb
: