Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVLRRLYKFAPEKKVYSYASLVLSAIATIFSVVPYFYLWKFLNELLVLKNLESANKYALWIFMFLVLQTLVYFLS----LYCSHMFAFRVERNLKIEGLNNLLEASFSFFDTNPSGKTRQIIDDNASETHSILAHMQPDMVNAMVYPVILLVVSFLVSISFGIVMVVSLVLGVFLITKMFGNQNFLQKYMASNEDMSSE----IVEYIRGVKVIKIFNIG---IEKF----RSLHKTIITS--------------SELGYAYAISCRKWKVFYDSFFMGLCMVTIPYGVYLLNINTHLGEIISYTVFFTAFIELLYNAFNKVMFLGQNKAKAKNSIDKLEEIFNKMQVKKLDSGLSDEIQNFDIEFEKVSFKYEGNTPYVLKDLSFKLDSGKSYALIGSSGSGKSTIAKLISGFYDVDSGVIKIGGRDIKEYSRETIASSIAFVFQNAKLFKMSIYDNVRIGNPDATYEEIMQALEKARCNEILDKFELRENTMIGAEGVYLSGGETQRIVIARAILKNSPIIILDEASAAADPENEYELQMAFTQLIKNKTVIMIAHRLSAIKNMDEIIVVENGQIIERGSSKLLLEDKSSKYSYFMNMYIRANDWIMSNEV |
| 3QF4 Chain:B ((25-591)) | ---LRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKEL----FEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLV-TLSIVPLTVLITQIVSSQT--RKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVG-------------TIATFIG----YSRQFTRPLNELSNQFNMIQM-------ALASAERIFEILDLEEEKDDPDAVELREVRGEIEFKNVWFSYDKKKP-VLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTSQYGLVVEK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289561 for 3857 contacts (-75.1/contact) +
2D Compatibility (PS) -56861 + (NN) -16670 + (LL) 3684
1D Compatibility (HY) -44800 + (ID) 8500
Total energy: -412708.0 ( -107.00 by residue)
QMean score : 0.384
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