Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESGAVDAEYYDAIIESTEEFGPYYILMPGMAMPHARPEAG--VKRDAFSLITLTEPVVFPDGKE--VSVLLALAATSSAIHTSVAIPQIIALFELENSIQRLTECQEAKEVLAMVEESKNSPYLEGLDLES
1J6T Chain:A ((10-147))
----------ENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDR-EKLTPTY-LGESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNE-HIQV-ITSLTNALDDESVIERLAHTTSVDEVLELLAGR-------------
General information:
TITO was launched using:
RESULT:
Template:
1J6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103245 for 1033 contacts (-99.9/contact) +
2D Compatibility (PS) -14302 + (NN) -2466 + (LL) 1964
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -130299.0 ( -126.14 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1J6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J6T-query.scw
PDB file :
Tito_Scwrl_1J6T.pdb
: