Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSENLGQLAINQARENGGKLEVISKVKVEDKRDLSIAYTPGVASVSSAIAEDVELAYELTTKKNTVAVVSDGSAVLGLGDIGPEAAMPVMEGKAALFKRFANVDAVPIVLKT------NDTEEIISIVKAISPTFGGINLEDISAPRCFEIEQRLIEECDIPVFHDDQHGTAIVVLAALFNSLKLVKKDIEDIRVVVNGGGSAGLSITRKLLSAGA--KHVTVVDRFGIINDKDRESLAPHHKAIAKL----TNREFQSGSLEDALENADVFIGVS--APEALHAEWISKMADKPIVFAMANPIPEIYPDQALKAGAYIVGTGRSDFPNQINNVLAFPGIFRGALDARAKTITVEMQIAAARGIASLIPEEELSTTHII-----PNAFQNDVADVVAKSVSNAVQK
3NV9 Chain:A ((45-432))-----------------GKIQIMPKCTLAGFNWFNAYYTPGVSRISTNIRDNNDSSLFYSLRGNFVGVVSDSTRVLGDGDVTPPGGLGVMEGKALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQHTFGAINLEDISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHN-GREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPYEAKEAGAYIVATGRGDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAASRALAEFAEKRGINPDNIIGTMDEPGIFPKEAADVAMQAIKDGVAR


General information:
TITO was launched using:
RESULT:

Template: 3NV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -232843 for 3271 contacts (-71.2/contact) +
2D Compatibility (PS) -39692 + (NN) -14521 + (LL) 1052
1D Compatibility (HY) -36000 + (ID) 8250
Total energy: -330254.0 ( -100.96 by residue)
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_3NV9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NV9-query.scw
PDB file : Tito_Scwrl_3NV9.pdb: