Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFAKRLRELRQLNNITQIEMANKLGLNRVTYTNYEREKSEPSISTLKEIATIFNVSIDYLIDFEDDTKGKNNRKKLLLSLEAELKKINRSFELEIKSLLIDLLNLIKTNQLSSCDVTKWLIDINEKDLECSSEILRFISEMPKEFEPIIDIIEIYQALNKNDE
3JXD Chain:L ((5-64))
--MGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD---------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3JXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25358 for 422 contacts (-60.1/contact) +
2D Compatibility (PS) -6384 + (NN) -341 + (LL) 8172
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -28711.0 ( -68.04 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_3JXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JXD-query.scw
PDB file :
Tito_Scwrl_3JXD.pdb
: