Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFINNYTLKIGNRILLENTNLDFEEGEINHLLGRNGSGKSQLAKDFIINRGNYFSNDIYEDTLIISSYSNL---PSDVTINDLERTIPW-------------------KLSK--------EIYQLLNINQISKTVKLKQLSDGQKQKVKLLVLLSLDKHIIILDEITNALDKKSVDEINVFLQNYIQYYPEKIIINISHDINNIRSLKGNYFLIDNQKICKVDTLDDAISWYLGE |
| 1OXT Chain:A ((12-227)) | ------VFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMR-IIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQT--WALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFP-RELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKE-VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63201 for 1369 contacts (-46.2/contact) +
2D Compatibility (PS) -19504 + (NN) -4776 + (LL) 732
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -98899.0 ( -72.24 by residue)
QMean score : 0.306
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