Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRIDDKT------AVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLLD
2DXQ Chain:A ((53-140))
-----------------------------------------------------IFVATENGKPVATATLLIVPNLTRAARPYAFIENVVTLEARRGR--GYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQNKTGFQIRQD---------------
General information:
TITO was launched using:
RESULT:
Template:
2DXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59996 for 516 contacts (-116.3/contact) +
2D Compatibility (PS) -8895 + (NN) -5361 + (LL) 5228
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -76224.0 ( -147.72 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_2DXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXQ-query.scw
PDB file :
Tito_Scwrl_2DXQ.pdb
: