Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNKNKIERQKRIKRLIQSGQIGTQEEIKLHLKNEGIDVTQATLSRDLREIGLLKLRSPEGKLYYSLSTATSNRFSP------ALRSYILKVSRASFMLVLNTNLGEASVLANFIDEKGLPEILGTMAGADTLLVICQNEDIAKVFEKELSVGL
1B4A Chain:A ((4-145))
------GQRHIKIREIIMSNDIETQDELVDRLREAGFNVTQATVSRDIKEMQLVKVPMANGRYKYSL--PSDQRFNPLQKLKRALVDVFIKLDGTGNLLVLRTLPGNAHAIGVLLDNLDWDEIVGTICGDDTCLIICRTPKDAKKVSNQLLSML
General information:
TITO was launched using:
RESULT:
Template:
1B4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74649 for 910 contacts (-82.0/contact) +
2D Compatibility (PS) -14979 + (NN) -8025 + (LL) 120
1D Compatibility (HY) -13200 + (ID) 2550
Total energy: -113283.0 ( -124.49 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_1B4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B4A-query.scw
PDB file :
Tito_Scwrl_1B4A.pdb
: