Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQTGTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW
4WXZ Chain:A ((18-270))
-----------------KGGVIMDVVNAEQAKIAEAAGAVAVMALER---------GVARMADPTVIEEVMNAVSIPVMA-VRIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEAARRIAEGASMLRT-GEPGTGNIVEAVRHMRKVNAQIRKVVNMSEDELVAEAKQLGAPVEVLREIKRLGRLPVVNFAAGGVTTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTHYEDYELIAHLSKG------------------------
General information:
TITO was launched using:
RESULT:
Template:
4WXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161925 for 2030 contacts (-79.8/contact) +
2D Compatibility (PS) -26951 + (NN) -18705 + (LL) 4000
1D Compatibility (HY) -32000 + (ID) 10300
Total energy: -245881.0 ( -121.12 by residue)
QMean score : 0.726
(partial model without unconserved sides chains):
PDB file :
Tito_4WXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WXZ-query.scw
PDB file :
Tito_Scwrl_4WXZ.pdb
: