Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRKRLDDTTQQIEKFKADKKESKTQK-----------TEQTDIGEGYDNLARLYQEGFHICNVHYGSVRKEDCLFCLSFLNKK |
2NCD Chain:A ((53-164)) | MERKELHNTVMDLRGNIRVFCRIRPPLES------EENRMCCTWTYH-----DESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21860 for 423 contacts (51.7/contact) +
2D Compatibility (PS) -9510 + (NN) 708 + (LL) 2488
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: 8096.0 ( 19.14 by residue)
QMean score : 0.172
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