Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALHYYCRHCGVKVGSLESSMVSTDSLGFQHLTNEERNDMISY-------KENGDVHVLTICEDCQEALDRNPHYHEYHTFIQ
2J2F Chain:D ((187-241))
--------------------------LGFIYTSFQERADFISHGNTARQAKEHGDIKLAQICGTI--AADEKRHETAYTKIVE
General information:
TITO was launched using:
RESULT:
Template:
2J2F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -942 for 260 contacts (-3.6/contact) +
2D Compatibility (PS) -4856 + (NN) -18 + (LL) 1856
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -7660.0 ( -29.46 by residue)
QMean score : 0.035
(partial model without unconserved sides chains):
PDB file :
Tito_2J2F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J2F-query.scw
PDB file :
Tito_Scwrl_2J2F.pdb
: