Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFSRERTITEIQNDYK-EQVER-----QNQLKKRRRKGLYRRLTVFGALVFLTAIVLASSVWSQ--TSSLSAKEEKKEQ-------LEKELKSLKTKQTDLKEEISKLKDEDYVTELARRDLFMSGDGEIIFNVEKKSK
4JLC Chain:A ((560-655))
--------ITEIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATK------------AMSHFSEECVRKYEAFKDKSEEWMRKMLHLRKQLLSLTNQCFDIEEEVSKY--QDYTNEL----------------------
General information:
TITO was launched using:
RESULT:
Template:
4JLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16022 for 317 contacts (50.5/contact) +
2D Compatibility (PS) -8809 + (NN) -5383 + (LL) 3484
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: -686.0 ( -2.16 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_4JLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JLC-query.scw
PDB file :
Tito_Scwrl_4JLC.pdb
: