Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVKDINDHLKVGDQVEVKVINVEKD-GKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
4NNG Chain:A ((293-367))
----IGQIVAGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANE--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4NNG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43624 for 521 contacts (-83.7/contact) +
2D Compatibility (PS) -7429 + (NN) 1531 + (LL) 2284
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -56388.0 ( -108.23 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_4NNG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NNG-query.scw
PDB file :
Tito_Scwrl_4NNG.pdb
: