Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMNDALTSLACSLKPGTTIKGKWNGNTYTLRKQLGKGANGIVYLA--ETSDGHVALKVSD-----DSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDAYIPSANTKVSFYAMEYIKGPLLLKYVSDK--GAEWIPVLMIQLLSSLSVLHQQGWIFGDLKPDNLIVTGPPARIRCIDVGGTTKEGRAIKEYTEFYDRGYW---------GYGTRKAEPSYDLFAVAMIMINSVHKKEFKKTNQPKEQLRSLIEGN--PLLQKYKKALFSALNGDYQSADEMKKDMLDAGQKAAQRKQPIKASPQPATRQRQQKPRQGKITKTRYTPKQKPAKSGGLFETTLIVISVLALYFAYIIFFLI |
4FIJ Chain:A ((326-541)) | --------------------------------KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----------VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYG-----PEVDIWSLGIMVIEMV-DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71613 for 1432 contacts (-50.0/contact) +
2D Compatibility (PS) -21077 + (NN) -8996 + (LL) 9016
1D Compatibility (HY) -13200 + (ID) 2200
Total energy: -108070.0 ( -75.47 by residue)
QMean score : 0.372
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