Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEG----CPFLLDWHIERLERALKDLQIEYTVSKHEILEMLDKLLKLNDIKD---------GNARVRLNISAGISDKGFVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEG--SFRLKSHHYLNNMYAKREIGNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDIGLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIEEVNYG-SQSGEATSALQLLYKKEIKNMIHEKGGRAWRSTQ |
1I1K Chain:A ((9-289)) | -IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIA-------AFPW-------ALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAF-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1I1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -131665 for 1978 contacts (-66.6/contact) +
2D Compatibility (PS) -27289 + (NN) -4391 + (LL) 2152
1D Compatibility (HY) -15200 + (ID) 3550
Total energy: -179943.0 ( -90.97 by residue)
QMean score : 0.446
|
|
|