Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAE---MVSDKAI-----------LYNNART-MGMLYIDEREKPLSLQIFGGKKETLVE-AAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAV--NKPVTVKMRMGWDE-DHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTA-NWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGENVAVREMRKHAAWYLKGVKGNANVRNEINHCETREEFVQLLDAFTVEVEAKELQNAKVG |
| 4YCP Chain:A ((8-247)) | -----------RVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTL--------VRVQLLGQFPQWLAENAARAVELGSWG--VDLNCGAP-------GGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEI--ADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-NLSRVVKYNE----------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148730 for 1840 contacts (-80.8/contact) +
2D Compatibility (PS) -22913 + (NN) -6299 + (LL) 9588
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -188254.0 ( -102.31 by residue)
QMean score : 0.569
|
|
|