Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVK-QEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQ-DLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV
1W77 Chain:A ((4-226))
-SVSVILLAGG-------SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEY--EESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVV------TLWEMQTPQVIKPELLKKGFELVKSEGLEVT-DVSIVEYLK-HPVYVSQGSYTNIKVTTPDDLLLAERILSE-------
General information:
TITO was launched using:
RESULT:
Template:
1W77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131107 for 1642 contacts (-79.8/contact) +
2D Compatibility (PS) -22279 + (NN) -8083 + (LL) 1296
1D Compatibility (HY) -19200 + (ID) 3800
Total energy: -183173.0 ( -111.55 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1W77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W77-query.scw
PDB file :
Tito_Scwrl_1W77.pdb
: