Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQKMAEYQS----YTGNRVIVVFDAHL----VKGLEKKQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGKIALSEEVLKTFEKWRRGDLD
2RBA Chain:A ((94-156))
---------------PGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIP----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15192 for 266 contacts (-57.1/contact) +
2D Compatibility (PS) -5876 + (NN) -1845 + (LL) 10152
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -19261.0 ( -72.41 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2RBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RBA-query.scw
PDB file :
Tito_Scwrl_2RBA.pdb
: