Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDK--------REKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMG-PVDPNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLITVKSAVKSK
4WFB Chain:B ((2-216))
-TKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKGNVPGPKKGLVEIRTSIK--
General information:
TITO was launched using:
RESULT:
Template:
4WFB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33575 for 1367 contacts (-24.6/contact) +
2D Compatibility (PS) -21864 + (NN) -4306 + (LL) 244
1D Compatibility (HY) -21200 + (ID) 7100
Total energy: -87801.0 ( -64.23 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_4WFB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WFB-query.scw
PDB file :
Tito_Scwrl_4WFB.pdb
: