Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNLTPRAASPIIEKVLKSAIANAEHNYEMDANNLVISQAFVDEGPTLKRFRPRAMGRASQINKRTSHITIVVSEKKEG
4WFB Chain:P ((2-110))
-EAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDG---
General information:
TITO was launched using:
RESULT:
Template:
4WFB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64797 for 783 contacts (-82.8/contact) +
2D Compatibility (PS) -11189 + (NN) -1044 + (LL) 204
1D Compatibility (HY) -10800 + (ID) 3900
Total energy: -91526.0 ( -116.89 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_4WFB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WFB-query.scw
PDB file :
Tito_Scwrl_4WFB.pdb
: