Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKTSKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLNVESTGDTSAATKVGELVAKRAAEKGISDVVFDRGGYLYHGRVKALADAAREAGLKF
4WFB Chain:L ((1-110))
MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKDSDIATTAT-KVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAE---------
General information:
TITO was launched using:
RESULT:
Template:
4WFB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6381 for 736 contacts (-8.7/contact) +
2D Compatibility (PS) -11883 + (NN) -3789 + (LL) 664
1D Compatibility (HY) -8800 + (ID) 3900
Total energy: -34089.0 ( -46.32 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_4WFB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WFB-query.scw
PDB file :
Tito_Scwrl_4WFB.pdb
: