Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVKKEKGRKRFRKRKTFGNQILPLELLIEKNKREIINSAELMEEIYMKIDEKHTQCVTK
4HJB Chain:C ((1-14))
-----------------------------------------RMKQIEDKLEE--------
General information:
TITO was launched using:
RESULT:
Template:
4HJB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3051 for 36 contacts (-84.8/contact) +
2D Compatibility (PS) -1274 + (NN) -1095 + (LL) 3752
1D Compatibility (HY) 0 + (ID) 200
Total energy: -1868.0 ( -51.89 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_4HJB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HJB-query.scw
PDB file :
Tito_Scwrl_4HJB.pdb
: