Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIGQKAWVNIGKTEFILLLVVGILTIINVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
5GAE Chain:V ((7-40))-RDDEVIVLTGKDKGKRGKVKNVLSSGKVIV-EGIN--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7418 for 169 contacts (-43.9/contact) +
2D Compatibility (PS) -3712 + (NN) 44 + (LL) 2236
1D Compatibility (HY) 1200 + (ID) 350
Total energy: -8000.0 ( -47.34 by residue)
QMean score : -0.128

(partial model without unconserved sides chains):
PDB file : Tito_5GAE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAE-query.scw
PDB file : Tito_Scwrl_5GAE.pdb: