Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAARKSNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPFAAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGCRPPKRRRV
4GKJ Chain:K ((1-116))--------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR-


General information:
TITO was launched using:
RESULT:

Template: 4GKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27624 for 880 contacts (-31.4/contact) +
2D Compatibility (PS) -13045 + (NN) -9662 + (LL) 1496
1D Compatibility (HY) -8800 + (ID) 3400
Total energy: -61035.0 ( -69.36 by residue)
QMean score : 0.656

(partial model without unconserved sides chains):
PDB file : Tito_4GKJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GKJ-query.scw
PDB file : Tito_Scwrl_4GKJ.pdb: