Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLKCTISYDGHLFNGYQVQPGK--RTVQDELEKALAVLH-------KSKDRIPVVSSGRTDSGVHAAGQVIHFDTPLSIPAERWPYALNALLPDDIAVKQAEIADDGFHARFSAVKKEYRY----FVYTEKHPDVFKRHYAYHFSYRLNVQDMREAAKHLI---GTHDFTSFCAAKTEVQD--KVRTIYELDWTE--TADGLQ---MRITGSGFLYNMVRIIAGTLLDAGIGKISPDEVKSMLEAKDREAAGRTAPGHGLYLWNVYYDN |
4NZ6 Chain:A ((9-262)) | ------MAYSGKGYHGMQR----QFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPTFAFAHKDRDVQDE------TYRLSAETLQQVNRLLACYKGTHNFHNFTSQKGP-QDPSACRYILEMYCEEPFVREGLEFAVIRVKGQSFMMHQIRKMVG-LVVAIVKGYAPESVLERSWGTEKVDVPK-APGLGLVLERVHFE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75198 for 1588 contacts (-47.4/contact) +
2D Compatibility (PS) -23693 + (NN) -8240 + (LL) 1328
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -122303.0 ( -77.02 by residue)
QMean score : 0.321
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