Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIYKGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHPDTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEK-LGVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDWTNPGVEKIIDNVTKQV------SGGDIILLHASDSAKQTEEALPD-IIHQLKEKGLKNVTVGDLIANSDAKSAEVK |
| 2Y8U Chain:A ((20-225)) | ------------------------------------------VPTGQVITQCTTPNT-IALTFDD--GPSEYTPQLLDLLSRYSARATFFVLGDAAAQNPGLLQRMRDEGHQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAP-AYMRPPYLETNELVLQVMRDLDYRVISASVDTKDYENQDADAII-NTSFQLFLDQLDAGGNIVLAH--DIHYWTVASLAERMLQEVNARGLIATTVGDCLGDGE------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3143 for 1692 contacts (-1.9/contact) +
2D Compatibility (PS) -21641 + (NN) -13226 + (LL) 5864
1D Compatibility (HY) -12400 + (ID) 3050
Total energy: -47596.0 ( -28.13 by residue)
QMean score : 0.498
|
|
|