Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIALVRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILMGGGFFNSWHNDHNFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNG--KLIIKGKIDGDVTVVNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLDAFNPNGEE |
3P4G Chain:A ((168-232)) | -------------------------------------------------------------------------------------------------------------------VSGIVNMGTDNDTVEVGRTINASGKVLLDTGDDSLLVSGDLFGEVDGGTGNDTIIIAGKVSGNIQ------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -7122 for 449 contacts (-15.9/contact) +
2D Compatibility (PS) -6497 + (NN) 1298 + (LL) 10500
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -6021.0 ( -13.41 by residue)
QMean score : 0.299
|
|
|