Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANSELTPELAFKVGR-FGGYVLTKDKQRPKVLIGRDTRISGHMLEGALVAGLLSIGAEVMRLGVISTPGVSYLTKAMDAEAGVMISASHNPVQDNGIKFFGGDGFKLSDEQ-EAEIERLMDEPEDKLPRPVGA--DLGLVNDYFEGGQKYLQFLKQTADEDFTGIHVALDCANGATSSLATHLFADLDADVSTMGTSPNGLNINDGVGSTHPEALS---AFVKEKNADLGLAFDGDGDRLIAVDEKGNIVDGDQIMYICSKHLKSEGRLKDDTVVSTVMSNLGFYKALEKEGIKSVQTAVGDRYVVEAMKKDGYNVGGEQSGHLIFLD-YNTTGDGLLSAIMLMNTLKATGKPLSELAAEMQKFPQLL----VNVRVTDKYKVEENEKVKAVISEVEKEMN-GDGRI---------------LVRPSGTEPLVRVMAEAKTKELCDEYVNRIVEVVRSEMGLE |
| 1K2Y Chain:X ((19-452)) | ---------IRGVVGDTLTAETAYWIGRAIGSESLARGE--PCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGAHNPPDYNGFKIVVA-GETLANEQIQALRERIE---KNDLASGVGSVEQVDILPRYFKQIRDDIAMAKP--------MKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGAD--IIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHV---FSAFPSDISTPEINITVTEDSKF-------AIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADT----EEELERIKTVFRNQL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1K2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154828 for 3525 contacts (-43.9/contact) +
2D Compatibility (PS) -43388 + (NN) -19097 + (LL) 1576
1D Compatibility (HY) -28800 + (ID) 6650
Total energy: -251187.0 ( -71.26 by residue)
QMean score : 0.523
|
|
|