Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTWHEVNDVIVITLPEIFDMNANLGYLTREKNECMYEIENNIITKVIAIGEIRSLVQVSVINNKQMIVQFLNDSRPVEQWKREEIVKYIHEWFDLDNDLT----PFYEMAKADPLLKMPARKFYGLRVIGIPDLFEALCWGVLGQQINLAFAYSLKKQFVEAFGDSIEWNGKKYWVFPPYERIARLTPTDLADIKMTVKKSEYIIGIARLMASGELSREKLMKMNFKDAEKNLIKIRGIGPWTANYVLMRCLRFPTAFPIDDVGLIHSIKILRNMNRKPTKDEILEISVPWKEWQSYATFYLWRVLY |
1PVS Chain:A ((10-272)) | -----------------YDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVV--TAIPDIARHTLHINLSAGLEPVAAECLAK-MSRLFDLQCNPQIVNGALGRLGAARP----------GLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLD-DFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMT--IPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDY-------LIKQRFPGMTPAQIRRYAERWKPWRSYALLHIW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139569 for 2046 contacts (-68.2/contact) +
2D Compatibility (PS) -27946 + (NN) -12644 + (LL) 4656
1D Compatibility (HY) -16800 + (ID) 3600
Total energy: -195903.0 ( -95.75 by residue)
QMean score : 0.376
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