Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFEWARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRKNFTVPVEYAGTQFQLAVWNALCEIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEMKTLLLDLEKRASSEMDVPH
1SFE Chain:A ((47-173))
-----------------------------------------LISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRRE-----------
General information:
TITO was launched using:
RESULT:
Template:
1SFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58346 for 817 contacts (-71.4/contact) +
2D Compatibility (PS) -13811 + (NN) -7353 + (LL) 3528
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -86582.0 ( -105.98 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_1SFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFE-query.scw
PDB file :
Tito_Scwrl_1SFE.pdb
: